Ecological niche and tolerance of oxygen

Ecosystems (Form and function) · Ecological niches · note 1 of 7

Ecological niche and tolerance of oxygenSpec B4.2.1, B4.2.2

In short

An ecological niche is the role of a species in an ecosystem, including all the biotic and abiotic interactions that influence its growth, survival and reproduction and how it obtains food. Tolerance of oxygen is part of a niche: obligate anaerobes are poisoned by oxygen, facultative anaerobes grow with or without it, and obligate aerobes need it.

An ecological niche is the role of a species in an ecosystem. It includes all the biotic interactions (food, predators, competitors, parasites, mutualists) and abiotic interactions (temperature, water, oxygen, light) that influence the growth, survival and reproduction of the species, including how it obtains food.

One abiotic part of a niche is whether a species can live with or without oxygen gas. Organisms fall into three groups.

Tolerance of oxygen
GroupTolerance of oxygenWhere found / example
Obligate anaerobeCannot survive in the presence of oxygen; oxygen is toxic to themAnoxic sediments, deep soil, the gut; e.g. Clostridium bacteria
Facultative anaerobeCan live with or without oxygen; respires aerobically when it is present and anaerobically when it is absentWide range of habitats; e.g. yeast (Saccharomyces cerevisiae), Escherichia coli
Obligate aerobeCannot survive without oxygen; needs it for aerobic respirationOxygenated air, water and soil; e.g. most animals and plants
Three test tubes of nutrient broth with oxygen diffusing in from the air, so oxygen concentration is high at the top and falls to zero lower down: the obligate aerobe grows only at the top, the obligate anaerobe only lower down where there is no oxygen, and the facultative anaerobe grows throughout, densest at the top. (opens full size in a new tab)
Where bacteria grow in a broth shows their tolerance of oxygen.
Common mistake:

Facultative means "optional", obligate means "must". A facultative anaerobe does not need to avoid oxygen; it simply copes without it.

Written and checked against the IB Biology SL specification · Updated October 2026

Frequently asked questions

What is the difference between a fundamental and a realized niche?

The fundamental niche is the potential niche of a species, based on its adaptations and tolerance limits. The realized niche is the actual extent of its niche when it is in competition with other species, so it is usually smaller. Removing a competitor often lets a species expand towards its fundamental niche.

What is the competitive exclusion principle?

The competitive exclusion principle states that two species with the same niche cannot coexist indefinitely in the same place. Competition leads either to the elimination of one species or to both being restricted to part of their fundamental niche. This is why each ecological niche in an ecosystem is unique.

What is the difference between holozoic and saprotrophic nutrition?

Holozoic nutrition, used by all animals, involves ingesting food, digesting it internally, then absorbing and assimilating the products. Saprotrophic nutrition, used by some fungi and bacteria, involves secreting enzymes onto dead organic matter, digesting it outside the cells and absorbing the products. Saprotrophs are therefore decomposers.

All 5 questions on Ecological niches